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Conference detail

Conference details

04.12.2016 - 09.12.2016

Proteomics Bioinformatics

Location
Wellcome Genome Campus, Wellcome Genome Campus , Hinxton, CB10 1RQ
Contact

Advanced Courses team

advancedcourses@wellcomegenomecampus.org

01223 496910

Country
United Kingdom
Subject area(s)
Internal Medicine
Shortinfo

The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields. The practical elements of the course will take raw data from a proteomics experiment and analyse it. Participants will be able to go from MS spectra, to identifying peptides and finally to lists of protein identifiers that can be analysed further using a wide range of resources. The final aim is to provide attendees with the practical bioinformatics knowledge they need to go back to the lab and process their own data (including large datasets) when collected.


The programme will include lecture and practical, computational sessions covering the following topics:

- Mass Spectrometry Basics

- MS Search Engines and post-processing software

- Quantitative proteomics

- Protein sequence databases and their use

- Protein sequence data in UniProt

- Post-translational modifications

- Standardisation of proteomics data

- MS proteomics repositories and the ProteomeXchange consortium

- PRIDE and PRIDE related tools

- Proteogenomics

- Protein interaction data through IntAct and the IMEX consortium

- Functional analysis of proteins using Cytoscape

- Placing proteins in pathways using Reactome


Limited bursaries are available (up to 50% of the course fee) and are awarded on merit. If you would like to apply for a bursary, please complete the bursary section of the online application form.


Application Deadline: 23 September 2016

 
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ZB MED is supported by the Federal Ministry of Health

ZB MED is supported by the Federal Ministry of Health.

The Federal Ministry of Health is a sponsor of ZB MED on the basis of a decision by the German Bundestag.

Local universities cooperate closely with ZB MED as partners

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The robust, well-established partnership between ZB MED and the University of Cologne covers research, teaching and the provision of information. The Scientific Director of ZB MED also holds a professorship at the Medical Faculty.

ZB MED is sponsered by the Ministry of Culture and Science of North Rhine-Westphalia

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The Ministry of Culture and Science of the German State of North Rhine-Westphalia is sponsoring ZB MED.

Local universities cooperate closely with ZB MED as partners

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A joint professorship is just one example of the cooperation between ZB MED and the University of Bonn in the fields of research and teaching. ZB MED’s Bonn site is located on the Poppelsdorf campus.

ZB MED advocates Open Access

ZB MED promotes and supports open access to scientific research through the PUBLISSO portal and other services.

Local universities cooperate closely with ZB MED as partners

ZB MED’s cooperation with TH Köln focuses on providing qualifications in information and data science through joint professorships and other strategies.

ZB MED is a member of DataCite

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DataCite is an international not-for-profit organisation that offers services and know-how relating to the management, referencing and citation of research data.

ZB MED and Bielefeld University have signed a cooperation agreement

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The objective is to work together to provide complementary information services for the life sciences.

ZB MED advocates equality

ZB MED received the TOTAL E-QUALITY award in 2010, 2013, 2017 and 2021 for successfully implementing equality in its staffing structure and personnel policies.

ZB MED is one of over 30 partners in the LFV Open Science

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